Job Description Q9VWX9 Confidence 3.64% Date Tue Jan 22 11:53:03 GMT 2013 Rank 92 Aligned Residues 63 % Identity 19% Template c3t5vE_ PDB info PDB header:transcription Chain: E: PDB Molecule:nuclear mrna export protein thp1; PDBTitle: sac3:thp1:sem1 complex Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		182	.	.	.	.	.	.	.	190	.	.	.	.	.																										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	I	G	Y	F	P	K	T	S	L	W	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Y	V	E	Y	R	S	K	G	F	E	P	T	G	S	Y	V	L	L	P	L	P	P	P	E	L	L	I	Y	K	R	M	C	R	L	C	L	Q	Q	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																																	.
Template Sequence		L	I	L	G	K	M	V	K	W	G	P	L	R	P	F	L	S	Q	E	T	I	D	N	W	S	V	L	Y	K	H	V	R	Y	G	N	I	Q	G	V	S	L	W	L	R	Q	N	E	R	H	L	C	A	R	Q	L	L	I	V	L	L	E	K	L	.	P	M	V	T	Y	R	N	L	I	K	T	V	I	K	S	W
Template Known Secondary structure				T	T					S	G	G	G	G	G	G	S																	T	T												T							T	T	T									.
Template Predicted Secondary structure																																																																	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		237	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	N	P	T	H	Q	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	E	W	G	Q	N	K	L
Template Known Secondary structure		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions