Return to main results Retrieve Phyre Job Id

Job DescriptionQ961S1
Confidence22.91%DateWed Feb 13 11:30:56 GMT 2013
Rank175Aligned Residues73
% Identity16%Templatec2hm8A_
PDB info PDB header:apoptosisChain: A: PDB Molecule:pdcd4 c-terminal ma-3 domain; PDBTitle: solution structure of the c-terminal ma-3 domain of pdcd4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.........370.........380.........390.........400.........410.........420..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SGFADEIEALKLALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRR
Query Conservation   
    
  
                   


 

  

  

 





                       
   
  
Alig confidence 














....


















....





































Template Conservation   
     





  .... 

 

  
 
  

   
.... 

  
  
 
 
   
  


     
      

  
Template Sequence  SGGQQPVNHLVKEID. . . . MLLKEYLLSGDISEAEHCL. . . . KELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKS
Template Known Secondary structure  S
SS



....

....


SSS
Template Predicted Secondary structure 





....


....




Template SS confidence 















































































   318.320.........330.. .......340.........350. ........360.........370.........380.........
 
   423
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   390
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions