 |
| Job Description | Q961S1 | | Confidence | 99.06% | Date | Wed Feb 13 11:30:56 GMT 2013 |
| Rank | 94 | Aligned Residues | 77 |
| % Identity | 22% | Template | c1x27F_ |
| PDB info |
PDB header:signaling protein | Chain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; |
PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
|
| Resolution | 2.70 Å |
|
 |
|   |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | E | Y | H | G | L | M | G | H | L | E | A | E | Q | L | L | . |
. |
A | N | A | R | D | G | S | Y | F | V | R | R | S | P | Q | S | D | G | Y | Y | T | L | S | L | R | F | N | K | R | P | K | H | Y | K | L | L | Y | K | . |
. |
. |
. |
P | G | V | G | H | Y | L | R | G | Q | D | K | R | F | D | T | V | H | D | M |
| Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
| . | . |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
| Template Sequence |   |
P | W | F | F | K | N | L | S | R | K | D | A | E | R | Q | L | L | A | P | G | N | T | H | G | S | F | L | I | R | E | S | E | S | T | A | G | S | F | S | L | S | V | R | D | F | D | Q | N | Q | G | E | V | V | K | H | Y | K | I | R | N | L | D | N | G | G | F | Y | I | S | P | R | I | T | F | P | G | L | H | E | L |
| Template Known Secondary structure |   |
T | T | B |
| S | S |
|
|  |  |  |  |  |  |  |  | T | S | S | S |
|
| T | T |  |  |  |  |  |  |
| S | S | S | T | T |
|  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  | S | S | T | T |
|
| B | S | S |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
|   |
|   |   |
155 | . | . |
| Predicted Secondary structure |   |
 |  |
|
| Query SS confidence |   |
|
|
|
| Query Sequence |   |
V | A | D |
| Query Conservation |   |
  |   |   |
| Alig confidence |   |
|
|
|
| Template Conservation |   |
|   |   |
| Template Sequence |   |
V | R | H |
| Template Known Secondary structure |   |
 |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
| Template SS confidence |   |
|
|
|
|   |   |
206 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|