Return to main results Retrieve Phyre Job Id

Job DescriptionQ961S1
Confidence99.20%DateWed Feb 13 11:30:56 GMT 2013
Rank65Aligned Residues77
% Identity22%Templatec1ka6A_
PDB info PDB header:immune systemChain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100 .........110.........120.........130....... ..140.........150.....
Predicted Secondary structure 











.




















....












Query SS confidence 



















.




































. . . .

















Query Sequence  SEYHGLMGHLEAEQLLANAR. DGSYFVRRSPQSDGYYTLSLRFNKRPKHYKLLYKPGV. . . . GHYLRGQDKRFDTVHDMV
Query Conservation      
  

  

  
    . 
  


 
        

           
      ....        
   

  
 
Alig confidence 



















.




































....

















Template Conservation   



 


  

 

      
 



 
        


     
 
  
                    
 

  

Template Sequence  AVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLI
Template Known Secondary structure  SSB

S



TT

SSSTT
SSS

TTS

STTS


SS
Template Predicted Secondary structure 






































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   156.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  AD
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  SA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   85.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions