Job Description O74352 Confidence 99.70% Date Sun Jul 8 11:50:45 BST 2012 Rank 4 Aligned Residues 219 % Identity 26% Template c4avmA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:bridging integrator 2; PDBTitle: crystal structure of the n-bar domain of human bridging2 integrator 2. Resolution 1.91 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	F	T	K	A	L	A	R	T	P	Q	T	L	R	S	K	F	N	V	G	E	I	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	V	Q	K	K	F	S	R	A	Q	E	K	V	L	Q	K	L	G	K	A	V	E	T	K	D	E	R	F	E	Q	S	A	S	N	F	Y	Q	Q	Q	A	E	G	H	K	L	Y	K	D	L	K	N	F	L	S	A	V	K	V	M	H	E	S	S	K	R	V	S	E	T	L	Q	E	I	Y	S	S	E	W	D
Template Known Secondary structure																			T	T	S	S																																																						S		T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	K	A	I	V	W	N	N	D	L	L	W	E	D	Y	E	E	K	L	A	D	Q	A	V	R	T	M	E	I	Y	V	A	Q	F	S	E	I	K	E	R	I	A	K	R	G	R	K	L	V	D	Y	D	S	A	R	H	H	L
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T										T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.																			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	Q	E	K	K	D	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E	I
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		E	A	V	Q	N	A	K	K	.	.	.	K	D	E	A	K	T	A	K	A	E	E	E	F	N	K	A	Q	T	V	F	E	D	L	N	Q	E	L	L	E	E	L	P	I	L	Y	N	S	R	I	G	C	Y	V	T	I	F	Q	N	I	S	N	L	R	D	V	F	Y	R	E	M	S	K	L	N	H	N	L	Y	E
Template Known Secondary structure						T		S	S	.	.	.																																					T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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