Job Description O74352 Confidence 63.07% Date Sun Jul 8 11:50:45 BST 2012 Rank 271 Aligned Residues 204 % Identity 10% Template c3vkgB_ PDB info PDB header:motor protein Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: crystal structure of an motor protein Resolution 2.81 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		T	K	A	L	A	R	T	P	Q	T	L	R	S	K	F	N	V	G	E	I	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	.	.	I	S	G	R
Query Conservation																																																																												.	.
Alig confidence																								.																																																				.	.
Template Conservation																								.
Template Sequence		R	D	Q	L	E	E	E	Q	L	H	L	N	I	G	L	K	K	L	R	D	T	E	.	A	Q	V	K	D	L	Q	V	S	L	A	Q	K	N	R	E	L	D	V	K	N	E	Q	A	N	Q	K	L	K	Q	M	V	Q	D	Q	Q	A	A	E	I	K	Q	K	D	A	R	E	L	Q	V	Q	L	D	V	R	N	K
Template Known Secondary structure																								.
Template Predicted Secondary structure																								.
Template SS confidence
		3275	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290	.	.	.	.	.	.		.	.	.	3300	.	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		E	I	A	V	Q	E	Q	L	E	N	A	A	N	E	L	K	L	K	Q	D	E	I	V	A	T	I	T	A	L	E	K	S	I	A	T	Y	K	E	E	Y	A	T	L	I	R	E	.	T	E	Q	I	K	T	E	S	S	K	V	K	N	K	V	D	R	S	I	A	L	L	D	N	L	N	S	E	R	G	R	W	E
Template Known Secondary structure				T	T				T	T	T	T																																				.
Template Predicted Secondary structure																																																.
Template SS confidence
		3354	.	.	.	.	.	3360	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.	.	.	.	.	.	.	.	3390	.	.	.	.	.	.	.	.	.		3400	.	.	.	.	.	.	.	.	.	3410	.	.	.	.	.	.	.	.	.	3420	.	.	.	.	.	.	.	.	.	3430	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		K	L	Q	E	K	K	D	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	.	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		Q	Q	S	E	N	F	N	T	Q	M	S	T	V	V	G	D	V	V	L	A	S	A	F	L	A	Y	I	G	F	F	D	Q	N	F	R	T	D	L	M	R	K	W	M	I	R	L	D	S	V
Template Known Secondary structure		T	T	T	T							T	T														T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		3576	.	.	.	3580	.	.	.	.	.	.	.	.	.	3590	.	.	.	.	.	.	.	.	.	3600	.	.	.	.	.	.	.	.	.	3610	.	.	.	.	.	.	.	.	.	3620	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions