Job Description O74352 Confidence 99.24% Date Sun Jul 8 11:50:45 BST 2012 Rank 204 Aligned Residues 191 % Identity 24% Template c3sogA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:amphiphysin; PDBTitle: crystal structure of the bar domain of human amphiphysin, isoform 1 Resolution 2.30 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G	R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	Q	F	E	E	Y	V	Q	N	F	K	R	Q	E	A	E	G	T	R	L	Q	R	E	L	R	G	Y	L	A	A	I	K	G	M	Q	E	A	S	M	K	L	T	E	S	L	H	E	V	Y	E	P	D	W	Y	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	V	K	M
Template Known Secondary structure																																																		T	T		S			S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																			.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K	K	L	Q	E	K	K	D	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E
Query Conservation
Alig confidence																																																															.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		V	G	E	K	C	D	V	L	W	E	D	F	H	Q	K	L	V	D	G	S	L	L	T	L	D	T	Y	L	G	Q	F	P	D	I	K	N	R	I	A	K	R	S	R	K	L	V	D	Y	D	S	A	R	H	H	L	E	A	L	Q	S	K	.	.	.	.	.	.	D	E	S	R	I	S	K	A	E	E	E	F	Q
Template Known Secondary structure																				T										T	T																								G	G	G	G	G				.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	Q	K	V	F	E	E	F	N	V	D	L	Q	E	E	L	P	S	L	W	S	R	R	V	G	F	Y	V	N	T	F	K	N	V	S	S	L	E	A	K	F	H	K	E	I	A	V	L	C	H	K	L	Y	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions