Job Description O74352 Confidence 87.56% Date Sun Jul 8 11:50:45 BST 2012 Rank 249 Aligned Residues 228 % Identity 10% Template c3qweA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:gem-interacting protein; PDBTitle: crystal structure of the n-terminal domain of the gem interacting2 protein Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		G	F	T	K	A	L	A	R	T	P	Q	T	L	R	S	K	F	N	V	G	E	I	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	.	.	A	D	A	C	I	E	I	Y	K	P	I	S
Query Conservation																																																																				.	.
Alig confidence																		.	.	.	.	.	.	.	.	.															.	.	.																									.	.
Template Conservation																		.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		G	V	D	A	A	L	E	Y	A	K	T	W	S	R	Y	A	.	.	.	.	.	.	.	.	.	K	E	L	L	A	W	T	E	K	R	A	S	Y	E	.	.	.	L	E	F	A	K	S	T	M	K	I	A	E	A	G	K	V	S	I	Q	Q	Q	S	H	M	P	L	Q	Y	I	Y	T	L	F	L	E	H	D	L
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.															.	.	.																			T	T			S		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	G	T	L	A	M	E	T	V	A	Q	Q	K	R	D	Y	Y	Q	P	L	A	A	K	R	T	E	I	E	K	W	R	K	E	F	K	E	Q	W	M	K	E	Q	K	R	M	N	E	A	V	Q	A	L	R	R	A	Q	L	Q	Y	V	Q	R	S	E	D	L	R	A	R	S	Q	G	S	K	Q	Q	E	R	R
Template Known Secondary structure																		T																																																					T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	K	L	Q	E	K	K	D	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	S	R	E	E	A	Q	A	K	A	Q	E	A	E	A	L	Y	Q	A	C	V	R	E	A	N	A	R	Q	Q	D	L	E	I	A	K	Q	R	I	V	S	H	V	R	K	L	V	F	Q	G	D	E	V	L	R	R	V	T	L	S	L	F	G	L	R	G	A	Q	A	E	R	G	P	R	A	F	A	A	L	A
Template Known Secondary structure																																																																							T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		243	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		334	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions