Job Description O74352 Confidence 98.54% Date Sun Jul 8 11:50:45 BST 2012 Rank 216 Aligned Residues 238 % Identity 13% Template c3pe0B_ PDB info PDB header:structural protein Chain: B: PDB Molecule:plectin; PDBTitle: structure of the central region of the plakin domain of plectin Resolution 2.95 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K	K	L	Q	E	K	K	D	K	S	L	K	D
Query Conservation
Alig confidence																																																																					.	.
Template Conservation																																																																					.	.
Template Sequence		E	S	L	H	S	F	V	A	A	A	T	K	E	L	M	W	L	N	E	K	E	E	E	E	V	G	F	D	W	S	D	R	N	T	N	M	T	A	K	K	E	S	Y	S	A	L	M	R	E	L	E	L	K	E	K	K	I	K	E	L	Q	N	A	G	D	R	L	.	.	L	R	E	D	H	P	A	R	P	T	V
Template Known Secondary structure																											T				S	T	T																																				.	.			S			T	T
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.			710	.	.	.	.	.	.	.	.	.	720
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	.	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E	I	Q	Y	F	D	F	N	T	D	I	L	E	S
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		E	S	F	Q	A	A	L	Q	T	Q	W	S	W	M	L	Q	L	C	C	C	I	E	A	H	L	K	E	N	A	A	Y	F	Q	F	F	S	D	V	R	E	A	E	G	Q	L	Q	K	L	Q	E	A	L	R	R	K	Y	S	C	D	R	S	A	T	V	T	R	L	E	D	L	L	Q	D	A	Q	D	E	K	E	Q
Template Known Secondary structure																																																											S				S									T
Template Predicted Secondary structure
Template SS confidence
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	R	R	R	G	D	V	K	D	R	A	E	A	L	T	I	T	K	F	K	T	A	K	P	T	Y	K	R	P	G	M	G	P	G	G	K	D	A	T	A	S	S	S	S	S	F	S	S	K	R	E	E	A	A	A	E	P	S	S	S	T	A	T	D	I	P	P	P	Y	S	T	P	S	V	A	G	A	S	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	E	Y	K	G	H	L	S	G	L	A	K	R	A	K	A	V	V	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		801	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	T	P	S	A	G	Y	Q	T	V	Q	T	T	T	T	T	T	E	A	A	A	A	Q	Y	P	Q	A	A	F	P	P	P	P	V	M	P	Q	P	A	A	A	A	V	T	T	P	V	A	A	P	V	A	A	A	A	A	A	V	P	V	P	P	P	A	P	A	P	A	A	A	P	A	A	E	H	V	V	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	R	H	P	A	H	P	R	L	P	L	L	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																			822	.	.	.	.	.	.	.	830	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		Y	D	Y	A	A	Q	A	A	G	D	L	S	F	H	A	G	D	R	I	E	V	V	S	R	T	D	N	Q	N	E	W	W	I	G	R	L	.	N	G	A	Q	G	Q	F	P	G	N	Y	V	Q	L
Query Conservation																																						.
Alig confidence								.	.	.																		.	.									.
Template Conservation								.	.	.																		.	.
Template Sequence		C	D	Y	K	Q	V	.	.	.	E	V	T	V	H	K	G	D	E	C	Q	L	V	G	P	A	Q	.	.	P	S	H	W	K	V	L	S	S	S	G	S	E	A	A	V	P	S	V	C	F	L	V
Template Known Secondary structure		S					S	.	.	.	S					T	T										S	.	.	T	T							T	T	S							G	G	G
Template Predicted Secondary structure								.	.	.																		.	.
Template SS confidence
		840	.	.	.	.	.				.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.			.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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