Job Description O74352 Confidence 61.42% Date Sun Jul 8 11:50:45 BST 2012 Rank 273 Aligned Residues 247 % Identity 11% Template c3lllA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:protein kinase c and casein kinase substrate in neurons PDBTitle: crystal structure of mouse pacsin2 f-bar domain Resolution 3.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G	R	A	S	D	.	.	.	.	.	.	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	R	T	V	K	R	I	D	D	G	H	R	L	C	G	D	L	M	N	C	L	H	E	R	A	R	I	E	K	A	Y	A	Q	Q	L	T	E	W	A	R	R	W	R	Q	L	V	E	K	G	P	Q	Y	G	T	V	E	K	A	W	I	A	V	M	S	E	A	E	R	V	S	E	L	H	L	E	V	K	A	S
Template Known Secondary structure		T																																																T	S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Query Sequence		L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	.	.	.	.	.	.	.	.	.	.	.	.	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K	K	L	Q	E	K	K	D	K	S	L	K	D	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Template Conservation
Template Sequence		L	M	N	E	D	F	E	K	I	K	N	W	Q	K	E	A	F	H	K	Q	M	M	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	L	K	E	V	E	A	A	K	K	A	H	H	T	A	C	K	E	E	K	L	A	I	S	R	E	A	N	S	K	A	D	P	S	L	N
Template Known Secondary structure					T											T	T			B		S	S	S	S	B	T	T																																													T		S	S				S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
									177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E	I	Q	Y	F	D	F	N
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	Q	L	K	K	L	Q	D	K	I	E	K	C	K	Q	D	V	L	K	T	K	D	K	Y	E	K	S	L	K	E	L	D	Q	T	T	P	Q	Y	M	E	N	M	E	Q	V	F	E	Q	C	Q	Q	F	E	E	K	R	L	R	F	F	R	E	V	L	L	E	V	Q	K	H	L	D	L	S	N	V	A	S	Y
Template Known Secondary structure											G	G	G	T	T	T					T														T	T	S																																							T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	L	E	S	Y	E	R	R	R	G	D	V	K	D	R	A	E	A	L	T	I	T	K	F	K	T	A	K	P	T	Y	K	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	I	Y	R	E	L	E	Q	S	I	K	A	A	D	A	V	E	D	L	R	W	F	R	A	N	H	G	P	G	M	A	M	N	W	P
Template Known Secondary structure														T														T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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