Job Description O74352 Confidence 94.85% Date Sun Jul 8 11:50:45 BST 2012 Rank 239 Aligned Residues 273 % Identity 7% Template c3i2wB_ PDB info PDB header:endocytosis Chain: B: PDB Molecule:syndapin; PDBTitle: crystal structure of efc/f-bar domain of drosophila2 syndapin/pacsin Resolution 2.67 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	K	A	L	A	R	T	P	Q	T	L	R	S	K	F	N	V	G	E	I	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	K	R	T	T	K	R	I	E	D	G	Y	K	L	C	.	.	.	.	.	.	.	.	.	N	D	L	Q	Q	L	I	Q	E	R	A	D	I	E	K	G	Y	A	K	S	L	R	T	W	S	K	K	W	G	E	L	I	E	K	G	P	E	Y	G	T	T	E	A	A	W	K	G	V	L	T	E	S	E	R	I
Template Known Secondary structure		T	T															.	.	.	.	.	.	.	.	.																																			S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	V	H	X	K	I	K	D	N	L	C	N	D	V	N	S	Q	I	K	T	W	Q	K	E	N	Y	H	H	T	L	X	Q	I	K	E	R	K	D	L	E	D	L	F	K	K	A	Q	K	P	W	A	K	L	L	A	K	V	E	K	A	K	A	D	Y	H	S	A	C	K	T	E	R	S	A	T	N	Q	E	R
Template Known Secondary structure															T																	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		165	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		K	L	Q	E	K	K	D	.	.	.	.	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		N	A	N	A	D	S	S	L	S	P	D	Q	V	K	K	X	H	D	R	V	Q	K	T	K	D	Q	V	Q	K	C	R	E	K	Y	E	Q	A	I	A	E	I	T	K	Y	N	S	V	Y	I	E	D	X	T	S	V	F	E	K	C	Q	T	F	E	K	T	R	L	Q	F	F	K	E	I	L	F	N	V	H	S	C
Template Known Secondary structure		T	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	I	Q	Y	F	D	F	N	T	D	I	L	E	S	Y	E	R	R	R	G	D	V	K	D	R	A	E	A	L	T	I	T	K	F	K	T	A	K	P	T	Y	K	R	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	L	T	K	V	Q	S	L	P	Q	I	Y	E	E	F	S	H	T	I	N	N	A	D	Q	Q	K	D	L	K	W	W	S	N	N	H	G	I	N	X	A	X	N	W	P	S
Template Known Secondary structure				G	G	G		S															T															S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions