Job Description O74352 Confidence 79.38% Date Sun Jul 8 11:50:45 BST 2012 Rank 256 Aligned Residues 242 % Identity 8% Template c3hahA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:human pacsin1 f-bar; PDBTitle: crystal structure of human pacsin1 f-bar domain (c2 lattice) Resolution 2.77 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G	R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	D	L	Q	K	N	L	A
Query Conservation
Alig confidence																																																					.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		Y	K	R	T	V	K	R	I	D	D	G	H	R	L	C	N	D	L	M	N	C	V	Q	E	R	A	K	I	E	K	A	Y	G	Q	Q	L	T	D	W	A	K	R	W	R	Q	L	I	E	K	G	P	.	.	.	.	.	Q	Y	G	S	L	E	R	A	W	G	A	I	M	T	E	A	D	K	V	S	E	L	H	Q
Template Known Secondary structure		T																																																	S	S	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	.	.	.	.	.	.	.	.	.	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K	K	L	Q	E	K	K	D	.	.	.	.	.	K	S	L	K	D	E	K	K	L	Y	E	A	E
Query Conservation																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		E	V	K	N	N	L	L	N	E	D	L	E	K	V	K	N	W	Q	K	D	A	Y	H	K	Q	I	M	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	M	K	E	L	E	A	A	K	K	A	Y	H	L	A	C	K	E	E	K	L	A	M	Q	D	K	V	D	K	C	K
Template Known Secondary structure										T															B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E	I	Q	Y	F	D	F	N	T	D	I	L	E	S	Y	E	R	R	R	G	D	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	V	Q	K	T	Q	E	K	Y	E	K	V	L	E	D	V	G	K	T	T	P	Q	Y	M	E	N	M	E	Q	V	F	E	Q	C	Q	Q	F	E	E	K	R	L	V	F	L	K	E	V	L	L	D	I	K	R	H	L	N	L	A	E	N	S	S	Y	I	H	V	Y	R	E	L	E	Q	A	I	R	G	A	D
Template Known Secondary structure																																																												G	G	G	S	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	E	A	L	T	I	T	K	F	K	T	A	K	P	T	Y	K	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	E	D	L	R	W	F	R	S	T	S	G	P	G	M	P	M	N	W	P
Template Known Secondary structure														S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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