Job Description O74352 Confidence 71.13% Date Sun Jul 8 11:50:45 BST 2012 Rank 268 Aligned Residues 85 % Identity 11% Template c3bt6B_ PDB info PDB header:viral protein Chain: B: PDB Molecule:influenza b hemagglutinin (ha); PDBTitle: crystal structure of influenza b virus hemagglutinin Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.
Predicted Secondary structure																										.	.	.																																														.	.	.
Query SS confidence																										.	.	.																																														.	.	.
Query Sequence		W	K	G	F	T	K	A	L	A	R	T	P	Q	T	L	R	S	K	F	N	V	G	E	I	.	.	.	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	.	.	.	D	A	C	I	E
Query Conservation																										.	.	.																																														.	.	.
Alig confidence																										.	.	.																																														.	.	.
Template Conservation
Template Sequence		L	K	S	T	Q	E	A	I	N	K	I	T	K	N	L	N	S	L	S	E	L	E	V	K	N	L	Q	R	L	S	G	A	M	D	E	L	H	N	E	I	L	E	L	D	E	K	V	D	D	L	R	A	D	T	I	S	S	Q	I	E	L	A	V	L	L	S	N	E	G	I	I	N	S	E	D	E	H	L	L	A
Template Known Secondary structure		T	T																												T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	P	I	S	G	R	A	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	R	K	L	K	K	M	L	G	P
Template Known Secondary structure										T		T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions