Job Description O74352 Confidence 79.02% Date Sun Jul 8 11:50:45 BST 2012 Rank 258 Aligned Residues 271 % Identity 9% Template c3acoB_ PDB info PDB header:endocytosis Chain: B: PDB Molecule:protein kinase c and casein kinase substrate in PDBTitle: crystal structure of the efc/f-bar domain of human2 pacsin2/syndapin ii (2.7 a) Resolution 2.70 Å

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		3	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		W	K	.	.	G	F	T	K	A	L	A	R	T	P	Q	T	L	R	S	K	F	N	V	G	E	I	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P
Query Conservation				.	.
Alig confidence				.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		W	E	V	G	N	Y	K	R	T	V	K	R	I	D	D	G	H	R	L	C	.	.	.	.	.	.	.	.	.	S	D	L	X	N	C	L	H	E	R	A	R	I	E	K	A	Y	A	Q	Q	L	T	E	W	A	R	R	W	R	Q	L	V	E	K	G	P	Q	Y	G	T	V	E	K	A	W	X	A	F	X	S	E
Template Known Secondary structure		T	S	T	T	T	T															.	.	.	.	.	.	.	.	.																																			S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		I	S	G	R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I	V	Y	.	.	.	.	.	.	.	.	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	R	V	S	E	L	H	L	E	V	K	A	S	L	X	N	D	D	F	E	K	I	K	N	W	Q	K	E	A	F	H	K	Q	X	X	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	L	K	E	V	E	A	A	K	K	A	H	H	A	A	C	K	E	E	K	L	A
Template Known Secondary structure																			T															B		S	S	S	S	B																																	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	Y	D	R	H	R	S	S	F	K	K	L	Q	E	K	K	D	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E	Q	S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		I	S	R	E	A	N	S	K	A	D	P	S	L	N	P	E	Q	L	K	K	L	Q	.	.	.	D	K	I	E	K	C	K	Q	D	V	L	K	T	K	E	K	Y	E	K	S	L	K	E	L	D	Q	G	T	P	Q	Y	X	E	N	X	E	Q	V	F	E	Q	C	Q	Q	F	E	E	K	R	L	R	F	F	R	E
Template Known Secondary structure		T	T					S	S	S		S	S			T	T	T	T	T	T	T	T	.	.	.	G	G	G	T	T	T																	T	T	T	T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Y	E	K	M	S	H	C	E	I	Q	Y	F	D	F	N	T	D	I	L	E	S	Y	E	R	R	R	G	D	V	K	D	R	A	E	A	L	T	I	T	K	F	K	T	A	K	P	T	Y	K	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	E	V	Q	K	H	L	D	L	S	N	V	A	G	Y	K	A	I	Y	H	D	L	E	Q	S	I	R	A	A	D	A	V	E	D	L	R	W	F	R	A	N	H	G	P	G	X	A	X	N	W	P
Template Known Secondary structure													T	T																																S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions