Job Description O74352 Confidence 26.52% Date Sun Jul 8 11:50:45 BST 2012 Rank 324 Aligned Residues 85 % Identity 9% Template c2v8sV_ PDB info PDB header:protein transport Chain: V: PDB Molecule:vesicle transport through interaction with PDBTitle: vti1b habc domain - epsinr enth domain complex Resolution 2.22 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G	R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		E	H	F	E	K	L	H	E	I	F	R	G	L	L	E	D	L	Q	G	V	P	E	R	L	L	G	T	A	G	T	.	E	E	K	K	K	L	V	R	D	F	D	E	K	Q	Q	E	A	N	E	T	L	A	E	M	E	E	E	L	R	Y	A	P	L	T	F	R	N	P	M	M	S	K	L	R	N	Y	R	K	D
Template Known Secondary structure																				T	S	T	T	T	S	S	S				S	.																													T	T	S
Template Predicted Secondary structure																																.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	D	L	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	L	H	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions