Job Description O74352 Confidence 99.28% Date Sun Jul 8 11:50:45 BST 2012 Rank 201 Aligned Residues 186 % Identity 22% Template c2ficA_ PDB info PDB header:endocytosis/exocytosis, membrane protein Chain: A: PDB Molecule:bridging integrator 1; PDBTitle: the crystal structure of the bar domain from human bin1/amphiphysin ii2 and its implications for molecular recognition Resolution 1.99 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K	P	I	S	G	R	A	S	D	P	E	S	Y	E	Q	E	G	N	A	E	G	I	E	A	A	E	A	Y	K	E	I
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	F	E	Q	C	V	Q	N	F	N	K	Q	L	T	E	G	T	R	L	Q	K	D	L	R	T	Y	L	A	S	V	K	A	M	H	E	A	S	K	K	L	N	E	C	L	Q	E	V	Y	.	.	.	.	.	.	.	.	.	.	.	E	P	D	W	P	G	R	D	E	A	N	K	I	A	E	N	N	D	L	L
Template Known Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.		T	T	S	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100												.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	D	L	Q	K	N	L	A	S	E	M	D	V	I	N	T	R	I	V	N	P	T	G	E	L	L	K	I	V	K	D	V	D	K	L	L	L	K	R	D	H	K	Q	L	D	Y	D	R	H	R	S	S	F	K	K	L	Q	E	K	K	D	K	S	L	K	D	E	K	K	L	Y	E	A	E	T	A	F	E	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		W	M	D	Y	H	Q	K	L	.	.	.	.	.	.	.	V	D	Q	A	L	L	T	M	D	T	Y	L	G	Q	F	P	D	I	K	S	R	I	A	K	R	G	R	K	L	V	D	Y	D	S	A	R	H	H	Y	E	S	L	Q	T	.	.	.	.	.	.	.	.	.	.	K	I	A	K	A	E	E	E	L	I	K
Template Known Secondary structure										.	.	.	.	.	.	.				T										T																															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.											.	.	.	.	.	.	.	180	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	E	Y	E	Y	Y	N	E	M	L	K	E	E	L	P	K	L	F	A	L	A	Q	S	F	I	A	P	L	F	Q	G	F	Y	Y	M	Q	L	N	V	Y	Y	V	L	Y	E	K	M	S	H	C	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	K	V	F	E	E	M	N	V	D	L	Q	E	E	L	P	S	L	W	N	S	R	V	G	F	Y	V	N	T	F	Q	S	I	A	G	L	E	E	N	F	H	K	E	M	S	K	L	N	Q	N	L	N	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions