Job Description O74352 Confidence 56.58% Date Sun Jul 8 11:50:45 BST 2012 Rank 276 Aligned Residues 93 % Identity 14% Template c1ru7B_ PDB info PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: 1934 human h1 hemagglutinin Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		W	K	G	F	T	K	A	L	A	R	T	P	Q	T	L	R	S	.	.	.	K	F	N	V	G	E	I	T	K	D	P	I	Y	E	D	A	G	R	R	F	K	S	L	E	T	E	A	K	K	L	A	E	D	A	K	K	Y	T	D	A	I	N	G	L	L	N	H	Q	I	G	F	A	D	A	C	I	E	I	Y	K
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		Q	K	S	T	Q	N	A	I	N	G	I	T	N	K	V	N	S	V	I	E	K	M	N	I	Q	F	T	A	V	G	K	E	F	N	K	L	E	K	R	M	E	N	L	N	N	K	V	D	D	G	F	L	D	I	W	T	Y	N	A	E	L	L	V	L	L	E	N	E	R	T	L	D	F	H	D	S	N	V	K	N
Template Known Secondary structure																							S													T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	S	G	R	A	S	D	P	E	S	Y	E	Q	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	E	K	V	K	S	Q	L	K	N	N	A	K	E	I
Template Known Secondary structure											T	T	S
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions