Job Description O74352 Confidence 99.85% Date Sun Jul 8 11:50:45 BST 2012 Rank 1 Aligned Residues 189 % Identity 13% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	A	K	P	T	Y	K	R	P	G	M	G	P	G	G	K	D	A	T	A	S	S	S	S	S	F	S	S	K	R	E	E	A	A	A	E	P	S	S	S	T	A	T	D	I	P	P	P	Y	S	T	P	S	V	A	G	A	S	D	Y	S	T	P	S	A	G	Y	Q	T	V	Q	T	T	T	T	T	T	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T
Template Known Secondary structure																												S										S																																										S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	Q	Y	P	Q	A	A	F	P	P	P	P	V	M	P	Q	P	A	A	A	A	V	T	T	P	V	A	A	P	V	A	A	A	A	A	A	V	P	V	P	P	P	A	P	A	P	A	A	A	P	A	A	E	H	V	V	A	L	Y	D	Y	A	A	Q	A	A	G	D	L	S	F	H	A	G	D	R	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L
Template Known Secondary structure																																																S	S			T	T								S	S		B				S	T	T				B		S	S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		436	.	.	.	440				.	.	.	.	.	.	.	.	.											450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure							.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	S	R	T	.	.	.	D	N	Q	N	E	W	W	I	G	.	.	.	.	.	.	.	.	.	.	R	L	N	G	A	Q	G	Q	F	P	G	N	Y	V	Q
Query Conservation							.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E
Template Known Secondary structure						S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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