Return to main results Retrieve Phyre Job Id

Job DescriptionO74352
Confidence37.96%DateSun Jul 8 11:50:45 BST 2012
Rank298Aligned Residues74
% Identity16%Templatec1gk4A_
PDB info PDB header:vimentinChain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2)
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


Query SS confidence 









































































Query Sequence  LARTPQTLRSKFNVGEITKDPIYEDAGRRFKSLETEAKKLAEDAKKYTDAINGLLNHQIGFADACIEIYKPISG
Query Conservation 
 
    
           
                   
                                  
Alig confidence 









































































Template Conservation 
      

  
  

             
  

 

  

  
     


 

  

 

 





 



Template Sequence  LKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEG
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 









































































   333......340.........350.........360.........370.........380.........390.........400......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions