Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4A7
Confidence4.85%DateSun Jul 8 11:45:05 BST 2012
Rank14Aligned Residues30
% Identity30%Templatec3sbgA_
PDB info PDB header:splicingChain: A: PDB Molecule:pre-mrna-splicing factor 8; PDBTitle: crystal structure of a prp8 c-terminal fragment
Resolution3.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960...... ...70.........80.........90.........100.....
Predicted Secondary structure 


......













Query SS confidence 







. . . . . .






































Query Sequence  TTVIIASP. . . . . . LRSIQLNKWSHQRSDLAFLNSRTNFLRIKELKEKIEKVK
Query Conservation 
 



  ......



         
     


  
 

  



  
  
Alig confidence 







......













.................







Template Conservation 
 
 



 

 
 




 
   



.................   




Template Sequence  GCIFTLNPKTGHLFLKIIHTSVWAGQKR. . . . . . . . . . . . . . . . . LSQLAKWK
Template Known Secondary structure 
TTT

GGGGTT
SS.................
Template Predicted Secondary structure 







.................
Template SS confidence 




















































   1877..1880.........1890.........1900.... .....1910..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions