Job Description C6Y4C6 Confidence 2.07% Date Sun Jul 8 11:45:09 BST 2012 Rank 93 Aligned Residues 57 % Identity 12% Template c4dgwB_ PDB info PDB header:splicing Chain: B: PDB Molecule:pre-mrna-splicing factor prp21; PDBTitle: crystal structure of the sf3a splicing factor complex of u2 snrnp Resolution 3.11 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		V	A	K	N	K	F	I	D	V	F	S	L	R	L	R	T	E	.	.	.	.	.	.	.	.	A	P	Q	R	D	P	R	D	N	I	Y	E	E	V	L	D	Q	I	D	S	L	N	L	D	P	K	Y	D	V	A	K	P	T	E	Q	E	T	E	F	I	I	R	K	L	G	V
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence							.	.											.	.	.	.	.	.	.	.					.																											.	.	.
Template Conservation							.	.																							.																											.	.	.
Template Sequence		Y	A	K	D	K	.	.	S	I	V	E	Q	X	I	S	K	D	G	E	A	R	L	N	F	X	N	S	S	H	.	P	L	H	K	T	F	T	D	F	V	A	Q	Y	K	R	V	Y	S	F	T	G	Q	E	I	K	K	.	.	.	S	K	R	T	I	L	D	N	C	F	E	R
Template Known Secondary structure			T	T	T	S	.	.	S									T			T	T	S	G	G	G	S	T	T	S	.	T	T															T	T	S	T	T						.	.	.
Template Predicted Secondary structure							.	.																							.																											.	.	.
Template SS confidence
		103	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions