Job Description C6Y4C6 Confidence 4.79% Date Sun Jul 8 11:45:09 BST 2012 Rank 23 Aligned Residues 37 % Identity 22% Template c3t98A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:nuclear pore complex protein nup54; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup54/nup58 Resolution 2.50 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	L	D	P	K	Y	D	V	A	K	P	T	E	Q	E	T	E	F	I	I	R	K	L	G	V	L	I	D	D	I	N	N	I	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	D	A	D	L	L	R	E	I	K	Q	H	L	K	Q	Q	Q	E	G	L	S	H	L	I	S	I	I	K	D	D	L	E	D	I	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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