Job Description C6Y4C6 Confidence 4.05% Date Sun Jul 8 11:45:09 BST 2012 Rank 32 Aligned Residues 91 % Identity 21% Template c3id5E_ PDB info PDB header:transferase/ribosomal protein/rna Chain: E: PDB Molecule:pre mrna splicing protein; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.		.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.				.										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.				.										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	F	I	D	V	F	S	L	R	L	R	T	E	A	P	Q	R	D	P	.	.	.	.	.	.	R	D	N	.	I	Y	E	E	V	L	D	Q	I	.	.	.	D	S	L	N	L	D	P	K	Y	D	V	A	K	P	T	E	Q	E	T	E	F	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.				.										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.				.										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	T	I	N	L	F	S	E	R	L	R	E	W	Y	S	I	H	F	P	E	L	D	K	L	I	E	D	H	E	E	Y	A	T	I	V	S	R	F	G	D	R	G	F	L	T	I	D	S	L	K	E	L	G	F	N	E	Q	R	I	N	R	I	L	D	A	A	K	K	S	I	G	A	D	I	S	E	D	D	L
Template Known Secondary structure																	T	T	T		S	T																		T		S	G	G	G								T	T																T			S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	L	G	V	L	I	D	D	I	N	N	I	K	L	S	D	K	E	I	K	G	K	M	V	I	N	L	S	K	V	Q	P	N	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	M	R	M	I	A	N	T	I	L	D	L	Y	N	I	R	R	N	L	N	N	Y	L	E	G	V	M	K	E	V	A	P	N	V	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions