 |
| Job Description | C6Y4C6 | | Confidence | 2.16% | Date | Sun Jul 8 11:45:09 BST 2012 |
| Rank | 88 | Aligned Residues | 22 |
| % Identity | 32% | Template | c1rpuA_ |
| PDB info |
PDB header:rna binding protein/rna | Chain: A: PDB Molecule:19 kda protein; |
PDBTitle: crystal structure of cirv p19 bound to sirna
|
| Resolution | 2.50 Å |
|
|   |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 30 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| Query Sequence |   |
W | E | S | K | V | Y | D | V | A | K | N | K | F | I | D | V | . |
. |
. |
. |
. |
. |
F | S | L | R | L | R |
| Query Conservation |   |
|
|
|   |
|   |   |   |
|   |   |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
W | T | G | D | S | V | N | Y | A | A | S | R | F | L | G | A | N | Q | V | G | C | T | Y | S | I | R | F | R |
| Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|