Email l.a.kelley@imperial.ac.uk Description C6Y4C5 Date Sun Jul 8 11:45:09 BST 2012 Unique Job ID f13ef4164a1ce267

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1lv3a_ 54.7 41 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Hypothetical zinc finger protein YacG 2 d2jw6a1 52.6 38 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 3 c2oddA_ 47.8 33 PDB header:metal binding protein Chain: A: PDB Molecule:protein cbfa2t1; PDBTitle: solution structure of the mynd domain from aml1-eto2 complexed with smrt, a corepressor 4 d2d8va1 43.5 53 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 5 c2jw6A_ 42.6 36 PDB header:transcription Chain: A: PDB Molecule:deformed epidermal autoregulatory factor 1 homolog; PDBTitle: solution structure of the deaf1 mynd domain 6 d2dj8a1 40.4 31 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 7 c2yqqA_ 39.9 30 PDB header:protein binding Chain: A: PDB Molecule:zinc finger hit domain-containing protein 3; PDBTitle: solution structure of the zf-hit domain in zinc finger hit2 domain-containing protein 3 (trip-3) 8 c2dj8A_ 39.6 31 PDB header:metal binding protein Chain: A: PDB Molecule:protein cbfa2t1; PDBTitle: solution structure of zf-mynd domain of protein cbfa2ti2 (protein mtg8) 9 d2dana1 38.2 32 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 10 d2d8qa1 32.3 29 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 11 c2danA_ 31.8 32 PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger mynd domain containing protein 10; PDBTitle: the solution structure of the mynd domain (leu384-cys430)2 of human zinc finger mynd domain containing protein 10 12 d1u5ka2 29.4 21 Fold:ArfGap/RecO-like zinc finger Superfamily:ArfGap/RecO-like zinc finger Family:RecO C-terminal domain-like 13 c3o37D_ 27.4 33 PDB header:transcription/protein binding Chain: D: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal structure of trim24 phd-bromo complexed with h3(1-10)k42 peptide 14 c3q8dB_ 25.6 29 PDB header:dna binding protein Chain: B: PDB Molecule:dna repair protein reco; PDBTitle: e. coli reco complex with ssb c-terminus 15 c1u5kA_ 25.3 13 PDB header:recombination,replication Chain: A: PDB Molecule:hypothetical protein; PDBTitle: recombinational repair protein reco 16 d1hcqa_ 22.9 29 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 17 d1ibia2 18.2 71 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 18 d2nlla_ 17.0 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 19 d1hraa_ 14.0 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 20 c2a66A_ 13.0 36 PDB header:transcription/dna Chain: A: PDB Molecule:orphan nuclear receptor nr5a2; PDBTitle: human liver receptor homologue dna-binding domain (hlrh-12 dbd) in complex with dsdna from the hcyp7a1 promoter 21 d1dsza_ not modelled 12.4 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 22 d1cita_ not modelled 12.4 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 23 c2gb5B_ not modelled 12.2 32 PDB header:hydrolase Chain: B: PDB Molecule:nadh pyrophosphatase; PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution 24 d2hana1 not modelled 12.2 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 25 c3u5pF_ not modelled 11.8 33 PDB header:transcription Chain: F: PDB Molecule:e3 ubiquitin-protein ligase trim33; PDBTitle: crystal structure of the complex of trim33 phd-bromo and h3(1-28)2 k9me3k14ack18ack23ac histone peptide 26 d2cona1 not modelled 11.7 38 Fold:Rubredoxin-like Superfamily:NOB1 zinc finger-like Family:NOB1 zinc finger-like 27 c3cbbA_ not modelled 11.3 54 PDB header:transcription/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 4-alpha, dna binding PDBTitle: crystal structure of hepatocyte nuclear factor 4alpha in2 complex with dna: diabetes gene product 28 d1r4ra_ not modelled 11.1 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 29 c1brvA_ not modelled 11.0 43 PDB header:glycoprotein Chain: A: PDB Molecule:protein g; PDBTitle: solution nmr structure of the immunodominant region of2 protein g of bovine respiratory syncytial virus, 483 structures 30 d1glua_ not modelled 10.9 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 31 c1r4iA_ not modelled 10.8 46 PDB header:transcription/dna Chain: A: PDB Molecule:androgen receptor; PDBTitle: crystal structure of androgen receptor dna-binding domain2 bound to a direct repeat response element 32 d1r4ia_ not modelled 10.8 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 33 d1lo1a_ not modelled 10.6 36 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 34 d1p91a_ not modelled 10.5 27 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase RlmA 35 d1r0na_ not modelled 10.5 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 36 d2hanb1 not modelled 10.0 33 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 37 c1r0nB_ not modelled 9.8 33 PDB header:transcription/dna Chain: B: PDB Molecule:ecdysone receptor; PDBTitle: crystal structure of heterodimeric ecdsyone receptor dna2 binding complex 38 c4acrB_ not modelled 9.6 31 PDB header:membrane protein Chain: B: PDB Molecule:glypican-1; PDBTitle: crystal structure of n-glycosylated, c-terminally truncated2 human glypican-1 39 d1a6ya_ not modelled 9.6 36 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 40 d1lata_ not modelled 9.5 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 41 d1r0oa_ not modelled 9.4 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 42 d1kb2a_ not modelled 9.4 36 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 43 d2jz6a1 not modelled 9.0 55 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L28 44 d2nllb_ not modelled 8.9 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 45 c1zr9A_ not modelled 8.9 36 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 593; PDBTitle: solution structure of a human c2h2-type zinc finger protein 46 d1zr9a1 not modelled 8.9 36 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger 47 d1dszb_ not modelled 8.8 46 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 48 c1t60R_ not modelled 8.6 25 PDB header:structural protein Chain: R: PDB Molecule:type iv collagen; PDBTitle: crystal structure of type iv collagen nc1 domain from2 bovine lens capsule 49 d1kb6b_ not modelled 8.6 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 50 c2hepA_ not modelled 8.5 40 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: solution nmr structure of the upf0291 protein ynzc from2 bacillus subtilis. northeast structural genomics target3 sr384. 51 d2hepa1 not modelled 8.5 40 Fold:Long alpha-hairpin Superfamily:YnzC-like Family:YznC-like 52 c2jl81_ not modelled 8.4 45 PDB header:ribosome Chain: 1: PDB Molecule:50s ribosomal protein l28; PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 4 of 4).3 this file contains the 50s subunit. 53 c3lqiA_ not modelled 8.2 18 PDB header:transferase Chain: A: PDB Molecule:mll1 phd3-bromo; PDBTitle: crystal structure of mll1 phd3-bromo complexed with h3(1-9)k4me22 peptide 54 d1ynwa1 not modelled 8.1 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 55 c2eblA_ not modelled 7.6 38 PDB header:transcription Chain: A: PDB Molecule:coup transcription factor 1; PDBTitle: solution structure of the zinc finger, c4-type domain of2 human coup transcription factor 1 56 c2wg7B_ not modelled 7.4 55 PDB header:hydrolase Chain: B: PDB Molecule:putative phospholipase a2; PDBTitle: structure of oryza sativa (rice) pla2 57 d1dx5i3 not modelled 7.4 57 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:EGF-type module 58 c2ybfB_ not modelled 7.4 22 PDB header:ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18; PDBTitle: complex of rad18 (rad6 binding domain) with rad6b 59 d2dara1 not modelled 7.3 57 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 60 c2q8aA_ not modelled 7.1 29 PDB header:immune system Chain: A: PDB Molecule:apical membrane antigen 1; PDBTitle: structure of the malaria antigen ama1 in complex with a growth-2 inhibitory antibody 61 c3bboY_ not modelled 7.1 36 PDB header:ribosome Chain: Y: PDB Molecule:ribosomal protein l28; PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome 62 d2yt9a2 not modelled 7.0 71 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 63 d2qamz1 not modelled 7.0 55 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L28 64 d2cora1 not modelled 6.9 64 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 65 c1t60W_ not modelled 6.7 25 PDB header:structural protein Chain: W: PDB Molecule:type iv collagen; PDBTitle: crystal structure of type iv collagen nc1 domain from2 bovine lens capsule 66 c2k0aA_ not modelled 6.7 32 PDB header:metal binding protein Chain: A: PDB Molecule:pre-mrna-splicing factor rds3; PDBTitle: 1h, 15n and 13c chemical shift assignments for rds3 protein 67 c3cngC_ not modelled 6.7 21 PDB header:hydrolase Chain: C: PDB Molecule:nudix hydrolase; PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea 68 c2x2zE_ not modelled 6.7 35 PDB header:membrane protein Chain: E: PDB Molecule:apical membrane antigen 1, putative; PDBTitle: crystal structure ama1 from toxoplasma gondii 69 d1xx6a2 not modelled 6.5 56 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Type II thymidine kinase zinc finger 70 c2envA_ not modelled 6.5 38 PDB header:transcription Chain: A: PDB Molecule:peroxisome proliferator-activated receptor delta; PDBTitle: solution sturcture of the c4-type zinc finger domain from2 human peroxisome proliferator-activated receptor delta 71 d1wila_ not modelled 6.4 33 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:variant PHD-like domain 72 c3qwvA_ not modelled 5.7 25 PDB header:transferase Chain: A: PDB Molecule:set and mynd domain-containing protein 2; PDBTitle: crystal structure of histone lysine methyltransferase smyd2 in complex2 with the cofactor product adohcy 73 d1oj8a_ not modelled 5.4 23 Fold:RNase A-like Superfamily:RNase A-like Family:Ribonuclease A-like 74 d1t0za_ not modelled 5.3 50 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Long-chain scorpion toxins 75 c2jmiA_ not modelled 5.1 29 PDB header:protein binding Chain: A: PDB Molecule:protein yng1; PDBTitle: nmr solution structure of phd finger fragment of yeast yng12 protein in free state 76 c2iybG_ not modelled 5.1 50 PDB header:metal-binding Chain: G: PDB Molecule:testin; PDBTitle: structure of complex between the 3rd lim domain of tes and2 the evh1 domain of mena 77 d1ryqa_ not modelled 5.1 35 Fold:Rubredoxin-like Superfamily:RNA polymerase subunits Family:RpoE2-like 78 d1hc7a3 not modelled 5.0 57 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS