Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4C5
Confidence25.32%DateSun Jul 8 11:45:09 BST 2012
Rank15Aligned Residues80
% Identity13%Templatec1u5kA_
PDB info PDB header:recombination,replicationChain: A: PDB Molecule:hypothetical protein; PDBTitle: recombinational repair protein reco
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60. ........70.........80
Predicted Secondary structure 




























.






Query SS confidence 



























































.


















Query Sequence  DLDYCIICGKPTTGNLYCSRECHLQDCPGCGSTSEQCSYSKSADLHMLSSQYLDHFRRRS. SMPSPSTSSSLLNGFVASR
Query Conservation 









 
 












 
    
 
    
 


 


 






 
 
.  


  


 



  

Alig confidence 










..

















.



























.


















Template Conservation   
  
  

  ..         

 

  
 .            
  
                   

  

  
   
Template Sequence  QTARCARCGAP. . DPEHPDPLGGQLLCSKCA. ALPPYPPAVLDFLRHAVRRTVRASFEQPVPSADRPALWRALEKFVTVQ
Template Known Secondary structure 

SB
TTT

B..S


TTTSS
TTT
.SS



TTTS
S


GGG
Template Predicted Secondary structure 










..










.












Template SS confidence 















































































   149150......... 160.........170....... ..180.........190.........200.........210.........220.....
 
   81...
Predicted Secondary structure 

Query SS confidence 



Query Sequence  LAVL
Query Conservation 
  
Alig confidence 



Template Conservation 

  
Template Sequence  VGGV
Template Known Secondary structure  S
S
Template Predicted Secondary structure 


Template SS confidence 



   226...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions