 |
| Job Description | C6Y4C4 | | Confidence | 0.81% | Date | Sun Jul 8 11:45:09 BST 2012 |
| Rank | 73 | Aligned Residues | 30 |
| % Identity | 20% | Template | c1yueA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:head vertex protein gp24; |
PDBTitle: bacteriophage t4 capsid vertex protein gp24
|
| Resolution | 2.90 Å |
|
|   |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | N | P | K | T | G | E | I | G | G | P | K | S | E | P | T | V | H | G | D | Y | S | Y | E | G | R | V | T | D | F |
| Query Conservation |   |
  |
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|   |
|
|
|   |   |   |
|
|   |   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
| Template Sequence |   |
A | N | P | Y | T | V | A | K | D | E | K | E | A | R | I | I | D | G | G | D | X | D | K | X | A | G | R | S | D | L |
| Template Known Secondary structure |   |
 |
| G | G | G | T |
|
| S | T | T | T | T | T | T | S |
| S | S |
| T | T | T | S | T | T |
|
| S | S |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
383 | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|