Job Description C6Y4C8 Confidence 2.18% Date Sun Jul 8 11:45:10 BST 2012 Rank 18 Aligned Residues 56 % Identity 23% Template d2gtta1 SCOP info Rhabdovirus nucleoprotein-like Rhabdovirus nucleoprotein-like Rhabdovirus nucleocapsid protein Resolution 3.49

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	R	K	S	Q	V	S	D	T	N	N	N	S	I	P	T	N	V	L	L	K	F	V	G	F	S	V	A	L	F	T	L	P	L	I	T	Y	F	W	T	L	K	T	L	F	K	G	Y	Q	T	L	Y	A	G	L	S	A	A	V	M	V	N	I	I	L	A	L	Y	I	V	A	A	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.
Template Sequence		L	S	G	K	S	P	Y	S	S	N	A	V	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	N	L	I	H	F	V	G	C	Y	M	G	Q	V	R	S	L	.	.	.	N	A	T	V	I	A	A	C	A	.	.	P	H	E	M	S	V	L	G	G	Y	L	G	E	E	F
Template Known Secondary structure		S		S	S		T	T	S	T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.												T	T						.	.	.	T	S	B			S	S	S		.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.														.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions