Job Description C6Y4C8 Confidence 4.00% Date Sun Jul 8 11:45:10 BST 2012 Rank 7 Aligned Residues 86 % Identity 12% Template c4djiA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter; PDBTitle: structure of glutamate-gaba antiporter gadc Resolution 3.19 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	S	Q	V	S	D	T	N	N	N	S	I	P	T	N	V	L	L	K	F	V	G	F	S	V	A	L	F	T	L	P	L	I	T	Y	F	W	T	L	K	T	L	F	K	G	Y	Q	T	L	Y	A	G	L	S	A	A	V	M	V	N	I	I	L	A	L	Y	I	V	A	A	F	R	E	D	S	G	T	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	H	P	D	L	K	R	T	F	N	I	P	G	G	K	G	V	K	L	V	V	A	I	V	G	L	L	T	S	I	M	A	F	I	V	S	F	L	P	P	D	N	I	Q	G	D	S	T	D	M	Y	V	E	L	L	V	V	S	F	L	V	V	L	A	L	P	F	I	L	Y	A	V	H	D	A	N	T	G	V	T
Template Known Secondary structure					S	S		B	S	S			S	S																							T	T				S		S	S	S	S			S	S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		83	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	K	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	P	I	N	S
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions