Job Description C6Y4C8 Confidence 2.45% Date Sun Jul 8 11:45:10 BST 2012 Rank 14 Aligned Residues 62 % Identity 16% Template c4ainB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of betp with asymmetric protomers. Resolution 3.10 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	G	F	S	V	A	L	F	T	L	P	L	I	T	Y	F	W	T	.	L	K	T	L	F	K	G	Y	Q	T	L	Y	A	G	L	S	A	A	V	M	V	N	I	I	L	A	L	Y	I	V	A	A	F	R	E	D	S	G	T	P	K	K	D	I	K	R	E
Query Conservation																				.
Alig confidence																				.					.	.	.
Template Conservation																									.	.	.
Template Sequence		A	A	W	G	V	A	T	A	A	I	G	L	T	L	L	L	S	G	G	D	N	A	L	.	.	.	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V	V	I	G	L	M	F	A	L	V	K	D	L	S	N	D	V	I	Y	L	E	Y	R	E
Template Known Secondary structure																	T	T		S	T				.	.	.											T																				T						T	T	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.				.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions