Job Description C6Y4C8 Confidence 1.11% Date Sun Jul 8 11:45:10 BST 2012 Rank 48 Aligned Residues 53 % Identity 15% Template c3tdsC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:formate/nitrite transporter; PDBTitle: crystal structure of hsc f194i Resolution 1.98 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		L	F	T	L	P	L	I	T	Y	F	W	T	L	K	T	L	F	K	G	Y	Q	T	L	Y	A	G	L	S	A	A	V	M	V	N	I	I	.	.	.	.	.	L	A	L	Y	I	V	A	A	F	R	E	D	S	G	T	P	K	K	D
Query Conservation																																						.	.	.	.	.
Alig confidence																		.	.																			.	.	.	.	.
Template Conservation																		.	.
Template Sequence		M	T	I	Y	S	V	S	L	F	S	P	T	I	S	T	V	.	.	T	I	G	G	A	I	Y	N	L	V	A	V	T	L	G	N	I	V	G	G	A	L	F	M	G	L	G	T	Y	I	L	G	K	E	K	L	N	A	A	A	E	N
Template Known Secondary structure												S	S			S	S	.	.																						T	T										S		S	S			S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions