Job Description C6Y4C8 Confidence 3.12% Date Sun Jul 8 11:45:10 BST 2012 Rank 11 Aligned Residues 67 % Identity 18% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	N	S	I	P	T	N	V	L	L	K	F	V	G	F	S	V	A	L	F	T	L	P	L	I	T	Y	F	W	T	L	K	T	L	F	K	G	Y	Q	T	L	Y	A	G	L	S	A	A	V	M	V	N	I	I	L	A	L	Y	I	V	A	A	F	R	E	D	S	G	T	P	K	K	D	I	K	R	E
Query Conservation
Alig confidence																																					.	.	.	.	.										.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.										.	.	.	.	.	.
Template Sequence		H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	.	.	.	.	.	I	V	Y	A	G	A	I	M	V	.	.	.	.	.	.	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L
Template Known Secondary structure				S																						T	T										.	.	.	.	.		T								.	.	.	.	.	.												S	S	T	T						T	T
Template Predicted Secondary structure																																					.	.	.	.	.										.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions