Job Description O13736 Confidence 32.12% Date Sun Jul 8 11:46:01 BST 2012 Rank 300 Aligned Residues 90 % Identity 22% Template c4e2uA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:pho rada intein; PDBTitle: crystal structures of radamin intein from pyrococcus horikoshii Resolution 1.58 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.							.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.							.
Query Sequence		E	R	E	I	S	I	V	E	D	E	I	V	C	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	E	D	D	W	Y	L	V	K	R	.	.	N	V	N	S	N	D	.	D	D	E	E	I	G	I	V	P	S	N	Y	I	T	E	A	E	P	S	T	K	M	K	A	L	Y	D	Y	T
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.							.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.							.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	E	V	Y	Y	E	N	D	T	V	P	H	M	E	S	I	E	E	M	Y	S	K	Y	A	S	M	N	G	E	L	P	F	D	N	G	Y	A	V	P	L	D	N	V	F	V	Y	T	L	D	I	A	S	G	E	I	K	K	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	S	Y	I	Y	R	E	K
Template Known Secondary structure		T								T	T																								T	T							S	S								T	T	T						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.	.	.	.	70	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	S	V	D	E	I	S	F	Q	A	D	Q	T	L	D	C	Y	G	D	T	D	S	D	W	I	L	V	G	F	N	N	N	F	G	L	A	P	R	N	Y	V	E	G
Query Conservation
Alig confidence																				.	.	.								.
Template Conservation																				.	.	.								.
Template Sequence		V	E	K	L	I	E	I	K	L	S	S	G	Y	S	L	K	V	T	.	.	.	P	S	H	P	V	L	L	.	F	R	D	G	L	Q	W	V	P	A	A	E	V	K	P
Template Known Secondary structure											T	T	S							.	.	.	T	T						.		S	S	S						G	G	G			T
Template Predicted Secondary structure																				.	.	.								.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions