Return to main results Retrieve Phyre Job Id

Job DescriptionO13736
Confidence99.61%DateSun Jul 8 11:46:01 BST 2012
Rank13Aligned Residues66
% Identity17%Templatec3nmzD_
PDB info PDB header:cell adhesion/cell cycleChain: D: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crytal structure of apc complexed with asef
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.
Predicted Secondary structure 



































Query SS confidence 

































































Query Sequence  ITEAEPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTDSDWILVGFNNNFGLAPRNYVEGMDASS
Query Conservation             


 
     




  
    
    
  
         
  
 



      
Alig confidence 

































































Template Conservation             




 
    



  

 
 
       

 
   
  
 

  

 
     
Template Sequence  LISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQD
Template Known Secondary structure  TS


SS
B



TTB

B
TT


SSS
SS
GGG

S

Template Predicted Secondary structure 





























Template SS confidence 

































































   190.........200.........210.........220.........230.........240.........250.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions