Job Description O13736 Confidence 96.30% Date Sun Jul 8 11:46:01 BST 2012 Rank 228 Aligned Residues 85 % Identity 13% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.															.	.
Predicted Secondary structure																																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	Y	E	P	Q	E	I	N	P	G	E	E	I	P	E	N	E	R	E	I	S	I	V	E	D	E	I	V	C	L	L	E	K	G	E	D	D	.	W	Y	L	V	K	R	N	V	N	S	N	D	D	D	E	E	I	G	I	V	P	S	N	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E
Query Conservation																																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		F	D	X	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	A	V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	E	.	.	.	.	.	.	.	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D	D	A	F	X	T	R	Y	E	S	G	S	L
Template Known Secondary structure				T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T										T	T	S	S						.	.	.	.	.	.	.		S	S							G	G	G														S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.															.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	S	T	K	M	K	A	L	Y	D	Y	T	Q	Q	S	V	D	E	I	S	F	Q	A	D	Q	T	L	D	C	Y	G	D	T	D	S	D	W	I	L	V	G	F
Query Conservation
Alig confidence																									.	.								.
Template Conservation																									.	.								.
Template Sequence		A	A	I	L	R	D	D	T	S	L	N	G	A	D	G	T	H	L	A	T	A	H	I	.	.	G	T	V	L	P	L	S	.	G	A	S	Q	V	G	R	T	V	L	V
Template Known Secondary structure						S	T	T						T	T	S								T	.	.	T							.				S	S
Template Predicted Secondary structure																									.	.								.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions