Job Description O13736 Confidence 34.62% Date Sun Jul 8 11:46:01 BST 2012 Rank 290 Aligned Residues 90 % Identity 13% Template c3ckpB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-secretase 1; PDBTitle: crystal structure of bace-1 in complex with inhibitor Resolution 2.30 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																									.																							.	.
Query SS confidence																									.																							.	.
Query Sequence		I	P	E	N	E	R	E	I	S	I	V	E	D	E	I	V	C	L	L	E	K	G	E	.	D	D	W	Y	L	V	K	R	N	V	N	S	N	D	D	D	E	E	I	G	I	V	.	.	P	S	N	Y	I	T	E	A	E	P	S	T	K	M	K	A	L	Y	D	Y	T	Q	Q	S	V	D	E	I	S	F	Q	A
Query Conservation																									.																							.	.
Alig confidence																									.																							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	K	F	P	D	G	F	W	L	G	E	Q	L	V	C	W	Q	A	G	T	T	P	W	N	I	F	P	V	I	S	L	Y	L	M	G	E	V	T	N	Q	S	F	R	I	T	I	L	P	Q	Q	Y	L	R	P	V	E	D	V	A	T	S	Q	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S				T	T	T	T	T	T	S	S						T	T				G	G	G	S										S	S	T	T																			S	S			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.													.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	T	L	D	C	Y	G	D	T	D	S	D	W	I	L	V	G	F	.	.	.	.	.	.	.	.	.	.	.	.	N	N	N	F	G	L	A	P	R	N
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	C	Y	K	F	A	I	S	Q	S	S	T	G	T	V	M	G	A	V	I	M	E	G	F	Y	V	V	F	D	R	A	R	K	R	I	G	F	A	V	S	A
Template Known Secondary structure		.										S	S										T	T							T	T	T	T								S
Template Predicted Secondary structure		.
Template SS confidence
			319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions