Return to main results Retrieve Phyre Job Id

Job DescriptionO13736
Confidence99.96%DateSun Jul 8 11:46:01 BST 2012
Rank6Aligned Residues123
% Identity15%Templatec2eyzA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog PDBTitle: ct10-regulated kinase isoform ii
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70........
Predicted Secondary structure 















































..
Query SS confidence 













































































. .
Query Sequence  MANLPIIGIYKVLYSYEPQEINPGEEIPENEREISIVEDEIVCLLEKGEDDWYLVKRNVNSNDDDEEIGIVPSNYITE. .
Query Conservation             
   
                

                 
                
 

  
   ..
Alig confidence 



















..........
























......
















..
Template Conservation             

  
    ..........  


   

 
 

      

  ......    
  
  
  

    
Template Sequence  ILRQEEAEYVRALFDFNGND. . . . . . . . . . EEDLPFKKGDILRIRDKPEEQWWNA. . . . . . EDSEGKRGMIPVPYVEKYR
Template Known Secondary structure 








S



S
..........SSS



TT


SSS......
TTS
STT

Template Predicted Secondary structure 













..........














......











Template SS confidence 















































































   128.130.........140....... ..150.........160.........170.. .......180.........190.
 
   7980.........90.........100.........110....
Predicted Secondary structure  ............................................
























Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AEPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTD
Query Conservation  ............................................        


 
     




  
    
    
Alig confidence  ............................................



































Template Conservation                                                        
   
    



  



 

    
Template Sequence  PASASVSALIGGNQEGSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINV
Template Known Secondary structure 
STTS






SS

S


S
S


SBTTB
SSSS
SSS

SS



S

SS
B


TT
SS


B
TTS


T
Template Predicted Secondary structure 
































































Template SS confidence 















































































   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   115....120.........130.........
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  SDWILVGFNNNFGLAPRNYVEGMDA
Query Conservation    
         
  
 



    
Alig confidence 
























Template Conservation   


 
   
  
 

 


  
  
Template Sequence  SGQWEGECNGKRGHFPFTHVRLLDQ
Template Known Secondary structure  TS
TT


TTS


SS
Template Predicted Secondary structure 








Template SS confidence 
























   272.......280.........290......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions