 |
| Job Description | O13736 | | Confidence | 99.48% | Date | Sun Jul 8 11:46:01 BST 2012 |
| Rank | 112 | Aligned Residues | 66 |
| % Identity | 21% | Template | c2d8hA_ |
| PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:sh3yl1 protein; |
PDBTitle: solution structure of the sh3 domain of hypothetical2 protein sh3yl1
|
| Resolution | UNK |
|
 |
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | A | N | L | P | I | I | G | I | Y | K | V | L | Y | S | Y | E | P | Q | E | I | N | P | G | E | E | I | P | E | N | E | R | E | I | S | I | V | E | D | E | I | V | C | L | L | E | K | G | E | D | D | W | Y | L | V | K | R | N | V | N | S | N | D | D | D | E | E | I | G | I | V | P | S | N | Y | I | T | E | A | E |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |
| Template Sequence |   |
V | G | N | L | N | Q | P | I | E | V | T | A | L | Y | S | F | E | G | Q | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | D | L | N | F | Q | A | G | D | R | I | T | V | I | S | K | T | D | S | H | F | D | W | W | E | G | K | . |
. |
. |
. |
. |
L | R | G | Q | T | G | I | F | P | A | N | Y | V | T | M | N | S |
| Template Known Secondary structure |   |
S |
|
|
| S | S |
|  |  |  |  |
| S | S |
|  |  |
| S | S | . | . | . | . | . | . | . | . | . | . | T | T | B |
|  |  |
| T | T |
|  |  |  |  |  |  |
|
| S |
| S | S | S |  |  |  |  |  | . | . | . | . | . |  | T | T |  |  |  |  |  |  | G | G | G |
|
| B |
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
|   |
|   |   |
81 |
| Predicted Secondary structure |   |
|
| Query SS confidence |   |
|
| Query Sequence |   |
P |
| Query Conservation |   |
  |
| Alig confidence |   |
|
| Template Conservation |   |
  |
| Template Sequence |   |
G |
| Template Known Secondary structure |   |
|
| Template Predicted Secondary structure |   |
|
| Template SS confidence |   |
|
|   |   |
76 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|