Job Description O13736 Confidence 99.43% Date Sun Jul 8 11:46:01 BST 2012 Rank 171 Aligned Residues 59 % Identity 27% Template c1u3oA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:huntingtin-associated protein-interacting PDBTitle: solution structure of rat kalirin n-terminal sh3 domain Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		I	Y	K	V	L	Y	S	Y	E	P	Q	E	I	N	P	G	E	E	I	P	E	N	E	R	E	I	S	I	V	E	D	E	I	V	C	L	L	E	K	G	E	D	.	.	D	W	Y	L	V	K	R	N	V	N	S	N	D	D	D	E	E	I	G	I	V	P	S	N	Y	I	T	E	A	E
Query Conservation																																												.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																					.	.									.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		L	T	V	V	L	Q	D	F	S	A	A	H	.	.	.	.	.	.	.	.	.	.	S	S	E	L	S	I	Q	V	G	Q	T	V	E	L	L	E	R	P	S	E	R	P	G	W	C	L	V	R	T	T	.	.	.	E	R	S	P	P	Q	E	G	L	V	P	S	S	T	L	C	I	S	H
Template Known Secondary structure						S	S		B				S	.	.	.	.	.	.	.	.	.	.	T	T				B		T	T						S	S		T	T	S	S	T	T							S	.	.	.	S	S	S	S								G	G	G	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30											.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions