 |
| Job Description | O13736 | | Confidence | 21.19% | Date | Sun Jul 8 11:46:01 BST 2012 |
| Rank | 374 | Aligned Residues | 55 |
| % Identity | 13% | Template | c1qniE_ |
| PDB info |
PDB header:oxidoreductase | Chain: E: PDB Molecule:nitrous-oxide reductase; |
PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution
|
| Resolution | 2.40 Å |
|
 |
|   |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| Query Sequence |   |
R | E | I | S | I | V | E | D | E | I | V | C | L | L | E | K | G | . |
E | D | D | W | Y | L | V | K | R | N | V | N | S | N | D | D | D | E | E | I | G | I | V | P | S | N | Y | I | T | E | A | E | P | S | T | K | M | K | A | L | Y | D | Y | T | Q | Q | S | V | D | E | I | S | F | Q | A | D | Q | T | L | D | C | . |
| Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |
| . |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
| Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |
| Template Sequence |   |
T | D | F | K | V | K | E | G | D | E | V | T | V | Y | I | T | N | L | D | M | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | T | H | G | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | M | V | N | H | G | V | . |
. |
. |
. |
S | M | E | I | S | P | Q | Q | T | A | S | V | T |
| Template Known Secondary structure |   |
S |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
|
|
| S | T | . | . | . | . | . | . | . | . | . | . | . | . | T |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T | S |
|
| . | . | . | . |  |  |  |  |
| T | T |
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
501 | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 530 | . | . | . | . | . | |
|
|
|
. | . | . | . | 540 | . | . | . | . | . | . | . | . |
|   |
|   |   |
110 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | G | D | T | D | S | D | W | I |
| Query Conservation |   |
  |   |   |   |
|   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |
|   |   |
| Template Sequence |   |
F | T | A | G | K | P | G | V | Y |
| Template Known Secondary structure |   |
 |  |
|
| S | S |  |  |  |
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|   |   |
549 | 550 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|