Job Description O13736 Confidence 99.97% Date Sun Jul 8 11:46:01 BST 2012 Rank 2 Aligned Residues 151 % Identity 15% Template c1ng2A_ PDB info PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	G	I	Y	K	V	L	Y	S	Y	E	P	Q	E	I	N	P	G	E	E	I	P	E	N	E	R	E	I	S	I	V	E	D	E	I	V	C	L	L	E	K	G	E	D	D	W	Y	L	V	K	R	N	V	N	S	N	D	D	D	E	E	I	G	I	V	P	S	N	Y	I	T	E	A	E	P	S	T	K	.	.
Query Conservation																																																																																.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.																								.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		L	Q	T	Y	R	A	I	A	D	Y	E	K	T	S	.	.	.	.	.	.	.	.	.	.	G	S	E	M	A	L	S	T	G	D	V	V	E	V	V	E	K	S	E	S	G	W	W	F	.	.	.	.	.	.	.	C	Q	M	K	A	K	R	G	W	I	P	A	S	F	L	E	P	L	D	S	P	D	E	T	E
Template Known Secondary structure								S	S		B			S	S	.	.	.	.	.	.	.	.	.	.	T	T				B		T	T										T	T	S				.	.	.	.	.	.	.												G	G	G				S	S		S	S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
												85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	M	K	A	L	Y	D	Y	T	Q	Q	S	V	D	E	I	S	F	Q	A	D	Q	T	L	D	C	Y	G	D	T	D	S	D	W	I	L	V	G	F	N	N	N	F	G	L	A	P	R	N	Y	V	E	G	M	D	A	S	S	A	P	A	S	Q	E	P	S	A	S	G	V	N
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	E	P	N	Y	A	G	E	P	Y	V	A	I	K	A	Y	T	A	V	E	G	D	E	V	S	L	L	E	G	E	A	V	E	V	I	H	K	L	L	D	G	W	W	V	I	R	K	D	D	V	T	G	Y	F	P	S	M	Y	L	Q	K	S	G	Q	D	V	S	Q	A	Q	R	Q	I	K	R	G	A	P	P
Template Known Secondary structure							T	T							S	S		B				S	T	T	B			B		T	T										T	T	S							T	T							G	G	G				T	T	S								T			S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	V	S	A	P	N	S	M	V	S	P	P	P	S	F	Q	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	S	S	I	R	N	A	H	S	I	H	Q	R	S	R	K	R	L	S
Template Known Secondary structure			G	G	G		S	S				S		S	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions