Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4C2
Confidence33.11%DateSun Jul 8 11:45:08 BST 2012
Rank6Aligned Residues30
% Identity27%Templatec3hkzY_
PDB info PDB header:transferaseChain: Y: PDB Molecule:dna-directed rna polymerase subunit 13; PDBTitle: the x-ray crystal structure of rna polymerase from archaea
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90...
Predicted Secondary structure 




Query SS confidence 





























Query Sequence  ELFYRLSNCVEKVLHNKISITDLKTEYEEI
Query Conservation 


 
     


    
 

    

  
Alig confidence 





























Template Conservation 













  










 
 
Template Sequence  ELLMRNTEIWDNLLNGKITLEEAKKLFEDN
Template Known Secondary structure  TTT

SS
Template Predicted Secondary structure 




Template SS confidence 





























   42.......50.........60.........70.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions