 |
| Job Description | Q9P7E8 | | Confidence | 99.70% | Date | Sun Jul 8 12:01:24 BST 2012 |
| Rank | 42 | Aligned Residues | 113 |
| % Identity | 21% | Template | c2l72A_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:actin depolymerizing factor, putative; |
PDBTitle: solution structure and dynamics of adf from toxoplasma gondii (tgadf)
|
| Resolution | UNK |
|
 |
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | S | F | Q | L | D | T | S | T | H | G | A | E | I | R | N | V | Y | E | K | V | L | S | G | A | D | D | C | S | W | A | I | F | G | Y | E | K | G | Q | G | N | I | L | K | V | V | A | S | G | N | D | N | D | E | F | L | D | E | F | D | E | N | A | V | L | F | G | F | L | R | V | K | D | V | N | T | G | L | N | K |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
| Template Conservation |   |
|
|
|
|
|   |
|   | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |   |   | . |   |   |   |   |
|
|   |   |
|   | . | . |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |
|
| Template Sequence |   |
M | A | S | G | M | G | V | D | . |
. |
. |
E | N | C | V | A | R | F | N | E | L | K | I | R | K | . |
T | V | K | W | I | V | F | K | I | E | . |
. |
N | T | K | I | V | V | E | K | D | G | K | G | N | A | D | E | F | R | G | A | L | P | A | N | D | C | R | F | G | V | Y | D | C | G | . |
. |
. |
. |
. |
. |
N | K |
| Template Known Secondary structure |   |
|
| T | T |
|  |  |
| . | . | . |  |  |  |  |  |  |  |  |  |  | T | T | T | T | . |
|
|
|  |  |  |  |  |  |  | . | . | T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
|
|
|
| S |
|
|  |  |  |  |  |
| S | . | . | . | . | . | . | S |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | |
|
|
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | |
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
. | . |
|   |
|   |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | V | L | V | C | W | C | G | E | A | A | A | . |
. |
R | K | G | L | F | S | I | H | M | A | T | V | S | N | L | L | K | G | Y | . |
H | V | Q | I | T | G | R | E | S | S | D | L | N | M |
| Query Conservation |   |
  |
|
|
|   |
|   |   |   |   |   |   | . | . |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |
|
|   |
|   |
|
|   |   |   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|   |
|   |
|   |   |
|   |
|
|   |
|
|   |
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|   |
| Template Sequence |   |
I | Q | F | V | L | W | C | P | D | N | A | P | V | K | P | R | M | T | Y | A | S | S | K | D | A | L | L | K | K | L | D | G | A | T | A | V | A | L | E | A | H | E | M | G | D | L | A | P |
| Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|
| S |
|  |  |  |  | S | S | T | T | T | T | S |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|