Return to main results Retrieve Phyre Job Id

Job DescriptionQ9P7E8
Confidence99.71%DateSun Jul 8 12:01:24 BST 2012
Rank28Aligned Residues129
% Identity19%Templatec2dybA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox)
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   721........730.........740.........750.........760.........770.........780.........790.........800
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  EHTQPTKTPAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNYVEITGPNETANNPPAEPQAGG
Query Conservation           
 
 


      

    

 
      
  
  
    
  



 



                   
Alig confidence 













































.
































Template Conservation           
 

         


   

 
 
       
  
 .     
 

  

  
                 
Template Sequence  RPRRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGT. VRGATGIFPLSFVKILKDFPEEDDPTNWLRCYY
Template Known Secondary structure  S






SS
B

SSSSB

B
TT

SSS.TTGGG



TT


Template Predicted Secondary structure 
























.

















Template SS confidence 















































































   151........160.........170.........180.........190...... ...200.........210.........220.........
 
   801... .....810.........820.. .......830.........840. ........850
Predicted Secondary structure 


......................












..







...

Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . .

















. .


















. . .








Query Sequence  PGKS. . . . . . . . . . . . . . . . . . . . . . VKAIYDYQAQEDNELSFF. . EDEIIANVDCVDPNWWEGE. . . CHGHRGLFP
Query Conservation      ......................  
 


 
    



 .. 

 
      
  

 
 ...  
  
 

Alig confidence 



......................

















..


















...








Template Conservation                           
   
          
   
 


 
 
    
        
    
 
 

Template Sequence  YEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFP
Template Known Secondary structure 
SS

S
TT



T
S

SSS


STTS

BTTB
S
Template Predicted Secondary structure 






































Template SS confidence 












































































   245....250.........260.........270.........280.........290.........300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions