Job Description Q9P7E8 Confidence 99.89% Date Sun Jul 8 12:01:24 BST 2012 Rank 12 Aligned Residues 196 % Identity 18% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	P	S	V	P	Q	P	P	A	A	P	V	V	P	E	V	P	S	V	P	Q	P	P	A	V	P	V	V	P	E	A	G	Q	L	N	E	P	V	V	P	P	L	P	P	H	D	E	T	Q	E	P	Q	V	G	G	D	V	K	A	T	E	H	T	Q	P	T	K	T	P	A	I	V	I	Y	D	Y	S	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A
Template Known Secondary structure																																			S										S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	N	E	I	E	L	V	E	N	E	Q	I	Q	I	L	E	F	V	D	D	G	W	W	L	G	E	N	S	K	G	Q	Q	G	L	F	P	S	N	Y	V	E	I	T	G	P	N	E	T	A	N	N	P	P	A	E	P	Q	A	G	G	P	G	K	S	V	K	A	I	Y	D	Y	Q	A	Q	E	D	N	E	L
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	.	.	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L
Template Known Secondary structure							S	S																					.	.																											S	S			T	T								S	S		B				S	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		820	.	.	.	.	.	.	.	.	.	830						.	.	.	.	.	.	.	.	.	840											.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	F	E	D	E	I	I	A	N	V	.	.	.	.	.	D	C	V	D	P	N	W	W	E	G	.	.	.	.	.	.	.	.	.	.	E	C	H	G	H	R	G	L	F	P	S	N	Y	V	E	E	I
Query Conservation													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure			B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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