Phyre 2 alignment of Q9P7E8 with c2vw9B_

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Job Description | Q9P7E8
Confidence | 30.65% | Date | Sun Jul 8 12:01:24 BST 2012
Rank | 319 | Aligned Residues | 36
% Identity | 6% | Template | c2vw9B_
PDB info | PDB header:dna-binding protein | Chain: B: PDB Molecule:single-stranded dna binding protein; | PDBTitle: single stranded dna binding protein complex from2 helicobacter pylori
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 821 | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | F | E | D | E | I | I | A | N | V | D | C | V | D | P | N | W | W | E | G | E | C | H | G | H | R | G | L | F | P | S | N | Y | V | E | E | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | S | K | G | S | S | V | L | I | E | G | R | L | T | Y | E | S | W | M | D | Q | . | T | G | K | K | N | S | R | H | T | I | T | A | D | S | L
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2067 | . | . | 2070 | . | . | . | . | . | . | . | . | . | 2080 | . | . | . | . | . | . | . |  | . | . | 2090 | . | . | . | . | . | . | . | . | . | 2100 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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