Phyre 2 alignment of Q9P7E8 with c1hh2P_

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Job Description | Q9P7E8
Confidence | 54.42% | Date | Sun Jul 8 12:01:24 BST 2012
Rank | 270 | Aligned Residues | 38
% Identity | 13% | Template | c1hh2P_
PDB info | PDB header:transcription regulation | Chain: P: PDB Molecule:n utilization substance protein a; | PDBTitle: crystal structure of nusa from thermotoga maritima
Resolution | 2.1 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 817 | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 |  | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | E | L | S | F | F | E | D | E | I | I | A | N | V | . | D | C | V | D | P | N | W | W | E | G | E | C | H | G | H | R | G | L | F | P | S | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | Y | S | E | L | K | G | T | V | T | T | A | E | V | I | R | V | M | G | E | W | A | D | I | R | I | G | K | L | E | T | R | L | P | K | K | E | W
Template Known Secondary structure |  |  |  | T | T |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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