Phyre 2 alignment of Q9P7E8 with d2do3a1

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Job Description | Q9P7E8
Confidence | 37.27% | Date | Sun Jul 8 12:01:24 BST 2012
Rank | 300 | Aligned Residues | 21
% Identity | 24% | Template | d2do3a1
SCOP info | SH3-like barrel | Translation proteins SH3-like domain | SPT5 KOW domain-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 821 | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | F | E | D | E | I | I | A | N | V | D | C | V | D | P | N | W | W | E | G | E | C | H | G | H | R | G | L | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | K | M | G | D | H | V | K | V | I | A | . | . | . | . | . | . | . | . | G | R | F | E | G | D | T | G | L | I
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  | S | S | . | . | . | . | . | . | . | . | S | T | T | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 472 | . | . | . | . | . | . | . | 480 | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | 490 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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