Phyre 2 alignment of Q9P7E8 with c3rd5A_

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Job Description | Q9P7E8
Confidence | 42.40% | Date | Sun Jul 8 12:01:24 BST 2012
Rank | 286 | Aligned Residues | 43
% Identity | 21% | Template | c3rd5A_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:mypaa.01249.c; | PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium paratuberculosis
Resolution | 1.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 85 | . | . | . | . | 90 | . | . |  |  |  | . | . |  |  |  |  |  | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |  |  | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . | . |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | W | C | G | E | A | A | A | . | . | . | R | K | . | . | . | . | . | G | L | F | S | I | H | M | A | T | V | S | N | L | L | . | . | K | G | Y | H | V | Q | I | T | G | R | E | S | S | D | L | N | M | D | D
Query Conservation |  |  |  |  |  |  |  |  |  | . | . | . |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | W | T | A | A | D | L | P | S | F | A | Q | R | T | V | V | I | T | G | A | N | S | G | L | G | A | V | T | A | R | E | L | A | R | R | G | A | T | V | I | M | A | V | R | D | T | R | K | G | E | A | A | A
Template Known Secondary structure |  |  |  |  | G | G | G |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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