Phyre 2 alignment of Q9P7E8 with d1o6ea_

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Job Description | Q9P7E8
Confidence | 30.62% | Date | Sun Jul 8 12:01:24 BST 2012
Rank | 320 | Aligned Residues | 44
% Identity | 18% | Template | d1o6ea_
SCOP info | Herpes virus serine proteinase, assemblin | Herpes virus serine proteinase, assemblin | Herpes virus serine proteinase, assemblin
Resolution | 2.3

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 805 | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . |  |  |  | . | . | . | . | 840 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | K | A | I | Y | D | Y | Q | A | Q | E | D | N | E | L | S | F | . | . | . | . | . | . | . | . | . | . | F | E | D | E | I | I | A | N | V | D | C | V | D | P | . | . | . | N | W | W | E | G | E | C | H | G | H | R | G | L | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | V | E | R | P | D | A | P | P | K | D | A | . | C | L | H | L | D | P | L | T | V | K | S | Q | L | P | L | K | K | P | L | P | L | T | V | E | H | L | P | D | A | P | V | G | S | V | F | G | L | Y | Q | S | S | A | G | L | F
Template Known Secondary structure |  |  |  |  |  | T | T | S |  |  | S | S | S | . | T | T |  |  |  |  |  |  |  |  |  |  |  | S |  | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . |  | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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