Phyre 2 alignment of Q9P7E8 with c2ke9A_

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Job Description | Q9P7E8
Confidence | 99.65% | Date | Sun Jul 8 12:01:24 BST 2012
Rank | 116 | Aligned Residues | 54
% Identity | 24% | Template | c2ke9A_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:caskin-2; | PDBTitle: nmr solution structure of the caskin sh3 domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 804 | . | . | . | . | . | 810 | . | . | . | . | . |  | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 850 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | V | K | A | I | Y | D | Y | Q | A | Q | E | . | D | N | E | L | S | F | F | E | D | E | I | I | A | N | V | D | C | V | D | P | N | W | W | E | G | E | C | H | . | . | . | . | . | . | G | H | R | G | L | F | P | S | N | Y | V | E | E | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | V | R | A | L | K | D | F | W | N | L | H | D | P | T | A | L | N | V | R | A | G | D | V | I | T | V | L | E | Q | H | P | D | G | R | W | K | G | H | I | H | E | S | Q | R | G | T | D | R | I | G | Y | F | P | P | G | I | V | E | V | V
Template Known Secondary structure |  |  |  |  |  | S | S |  | B |  |  |  | S |  | T | T | B |  |  | B |  | T | T |  |  |  |  |  | S |  | S | S |  | S | S |  |  |  |  |  |  |  |  | S | S | T | T | S |  |  |  |  |  |  |  | G | G | G |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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