Job Description C6Y4B8 Confidence 3.05% Date Sun Jul 8 11:45:07 BST 2012 Rank 46 Aligned Residues 66 % Identity 14% Template d1rp3a1 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 domain Resolution 2.30

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Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	V	F	L	S	E	I	E	Y	A	N	K	S	S	K	P	V	T	T	D	L	D	V	L	R	V	L	K	K	N	I	K	K	R	K	Q	A	I	E	Q	F	R	K	A	E	R	L	D	L	A	E	K	E	E	S	Q	I	Q	T	L	R	Q	F	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	R	I	K	E	V	V	E	K	L	K	E	K	L	G	R	E	P	T	D	E	E	V	A	K	E	L	G	I	S	T	E	E	L	F	K	T	L	D	K	I	N	F	S	Y	I	L	S	L	E	E	V	F	R	D	F	A	R	D	Y	S	E	L	I	P
Template Known Secondary structure																	S	S												T	S																																T	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions