Email l.a.kelley@imperial.ac.uk Description C6Y4B2 Date Sun Jul 8 11:45:06 BST 2012 Unique Job ID b74d4ef677be47cc

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2y9mB_ 55.6 16 PDB header:ligase/transport protein Chain: B: PDB Molecule:peroxisome assembly protein 22; PDBTitle: pex4p-pex22p structure 2 d2i5nh2 44.1 64 Fold:Single transmembrane helix Superfamily:Photosystem II reaction centre subunit H, transmembrane region Family:Photosystem II reaction centre subunit H, transmembrane region 3 d1jdqa_ 21.4 21 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 4 d1cola_ 21.4 21 Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin 5 d1gjwa1 21.2 60 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 6 c3qqcA_ 20.0 18 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit b, dna-directed rna PDBTitle: crystal structure of archaeal spt4/5 bound to the rnap clamp domain 7 d2etda1 19.5 22 Fold:Bromodomain-like Superfamily:LemA-like Family:LemA-like 8 d1ciia1 17.5 18 Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin 9 d1fkma2 17.5 27 Fold:Left-handed superhelix Superfamily:Ypt/Rab-GAP domain of gyp1p Family:Ypt/Rab-GAP domain of gyp1p 10 d1je3a_ 17.4 21 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 11 d1rh1a2 14.9 15 Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin 12 c1gj8A_ 10.6 63 PDB header:blood clotting, hydrolase Chain: A: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: engineering inhibitors highly selective for the s1 sites of ser1902 trypsin-like serine protease drug targets 13 c1gjaA_ 10.6 63 PDB header:blood clotting, hydrolase Chain: A: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: engineering inhibitors highly selective for the s1 sites of ser1902 trypsin-like serine protease drug targets 14 c1gjdA_ 10.6 63 PDB header:blood clotting, hydrolase Chain: A: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: engineering inhibitors highly selective for the s1 sites of ser1902 trypsin-like serine protease drug targets 15 d1a87a_ 10.2 13 Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin 16 c1a87A_ 10.2 13 PDB header:bacteriocin Chain: A: PDB Molecule:colicin n; PDBTitle: colicin n 17 d1pava_ 9.5 15 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 18 c3fewX_ 9.4 19 PDB header:immune system Chain: X: PDB Molecule:colicin s4; PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain 19 d1p9ga_ 9.2 57 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant lectins/antimicrobial peptides Family:Hevein-like agglutinin (lectin) domain 20 d1dcja_ 8.9 12 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 21 c2kmcA_ not modelled 8.0 30 PDB header:cell adhesion Chain: A: PDB Molecule:fermitin family homolog 1; PDBTitle: solution structure of the n-terminal domain of kindlin-1 22 c1rh1A_ not modelled 8.0 16 PDB header:antibiotic Chain: A: PDB Molecule:colicin b; PDBTitle: crystal structure of the cytotoxic bacterial protein2 colicin b at 2.5 a resolution 23 c3oq0D_ not modelled 8.0 33 PDB header:cell cycle Chain: D: PDB Molecule:dbf4; PDBTitle: crystal structure of motif n of saccharomyces cerevisiae dbf4 24 c2lgxA_ not modelled 8.0 37 PDB header:cell adhesion Chain: A: PDB Molecule:fermitin family homolog 2; PDBTitle: nmr structure for kindle-2 n-terminus 25 c3mlrP_ not modelled 7.6 62 PDB header:immune system Chain: P: PDB Molecule:hiv-1 gp120 third variable region (v3) crown; PDBTitle: crystal structure of anti-hiv-1 v3 fab 2557 in complex with a ny5 v32 peptide 26 c3nohA_ not modelled 7.3 16 PDB header:peptide binding protein Chain: A: PDB Molecule:putative peptide binding protein; PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution 27 c3qwlA_ not modelled 7.2 17 PDB header:hydrolase activator Chain: A: PDB Molecule:tbc1 domain family member 7; PDBTitle: crystal structure of human tbc1 domain family member 7 28 c3lnoA_ not modelled 7.1 54 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of domain of unknown function duf59 from2 bacillus anthracis 29 c1agqB_ not modelled 6.9 29 PDB header:growth factor Chain: B: PDB Molecule:glial cell-derived neurotrophic factor; PDBTitle: glial cell-derived neurotrophic factor from rat 30 c2i88A_ not modelled 6.8 22 PDB header:membrane protein Chain: A: PDB Molecule:colicin-e1; PDBTitle: crystal structure of the channel-forming domain of colicin2 e1 31 c2pijB_ not modelled 6.6 25 PDB header:transcription Chain: B: PDB Molecule:prophage pfl 6 cro; PDBTitle: structure of the cro protein from prophage pfl 6 in pseudomonas2 fluorescens pf-5 32 d1u3da2 not modelled 6.4 21 Fold:Cryptochrome/photolyase, N-terminal domain Superfamily:Cryptochrome/photolyase, N-terminal domain Family:Cryptochrome/photolyase, N-terminal domain 33 d1d1la_ not modelled 6.2 25 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 34 c2diiA_ not modelled 6.1 47 PDB header:transcription Chain: A: PDB Molecule:tfiih basal transcription factor complex p62 PDBTitle: solution structure of the bsd domain of human tfiih basal2 transcription factor complex p62 subunit 35 d1uwda_ not modelled 6.0 27 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 36 d2ha2a1 not modelled 5.6 17 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Acetylcholinesterase-like 37 d2diia1 not modelled 5.6 47 Fold:BSD domain-like Superfamily:BSD domain-like Family:BSD domain 38 d4croa_ not modelled 5.6 25 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 39 d2cu6a1 not modelled 5.2 23 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 40 c2yy8B_ not modelled 5.2 24 PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine 41 d1dwua_ not modelled 5.1 20 Fold:Ribosomal protein L1 Superfamily:Ribosomal protein L1 Family:Ribosomal protein L1