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Job DescriptionQ09746
Confidence42.97%DateSun Jul 8 11:56:56 BST 2012
Rank279Aligned Residues107
% Identity14%Templatec3ipkA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  SSIEKEYAQKLASLSNKYGEKKSRKSSALSVGDTPAMSAGSLECASLTTWSKILDELTRSSKTHQKLSDDYSLDIAEKLK
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Template Sequence  AANEADYQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAENTAIKKRNADAKADYEAKLAKYQADL. AKYQ
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   386...390.........400.........410.........420.........430.........440.........450.........460 ....
 
   121........130.........140........
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Query Sequence  KLESHIEALRKVYDDLYKKFSSEKETLL
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Template Conservation                              
Template Sequence  KDLADYPVKLKAYEDEQTSIKAALAELE
Template Known Secondary structure  G
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   465....470.........480.........490..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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