Return to main results Retrieve Phyre Job Id

Job DescriptionQ09746
Confidence94.64%DateSun Jul 8 11:56:56 BST 2012
Rank238Aligned Residues100
% Identity20%Templatec3h41A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   539540.........550......... 560.........570.........580.........590.........600.. .....
Predicted Secondary structure 












.........





































..




Query SS confidence 




















. . . . . . . . .










































. .




Query Sequence  GQEFTLLEPDDGSGWVRVKID. . . . . . . . . GTDGLIPASYVKLNDELNTSVTLDGDSSYVKALYAYTAQSDME. . LSIQE
Query Conservation 
             
      .........   
  
                        


 
 
    
..


  
Alig confidence 









..








.........










































..




Template Conservation 

 
 

   ..


  
 
  
 
    


 


    
               


     
            

 
Template Sequence  GQEVTVVDKK. . GDWVKVLVHGQPTPRNEEGYPGWXPEKQLTYNQEFADKTNEPFVLVTKPTAILYINPSEKHKSLEVSY
Template Known Secondary structure  T
..TTTT

BTTBSS
GGG

TTTS

SSSS
TT

T
Template Predicted Secondary structure 

..


















































Template SS confidence 















































































   8990........ .100.........110.........120.........130.........140.........150.........160......
 
   608.610.........620....... ..630.........640..
Predicted Secondary structure 







.




Query SS confidence 



















.














Query Sequence  GDIIQVTNRNAGNGWSEGIL. NGVTGQFPANYVTDV
Query Conservation 

 
 
      


  
  . 
  
 

 


   
Alig confidence 











..





.














Template Conservation 

 



 
   ..   
  
 
  
 
        
Template Sequence  NTRLPLLSEDTI. . SYRVLLPNGQKAWLRKNDGTFY
Template Known Secondary structure  T

SS..
TTS
GGG
Template Predicted Secondary structure 





..















Template SS confidence 



































   167..170........ .180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions